Back to Build/check report for BioC 3.18: simplified long |
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This page was generated on 2023-05-10 10:04:32 -0000 (Wed, 10 May 2023).
Hostname | OS | Arch (*) | R version | Installed pkgs |
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kunpeng1 | Linux (Ubuntu 22.04.1 LTS) | aarch64 | R Under development (unstable) (2023-03-12 r83975) -- "Unsuffered Consequences" | 6211 |
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To the developers/maintainers of the Harshlight package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/Harshlight.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. Note: If "R CMD check" recently failed on the Linux builder over a missing dependency, add the missing dependency to "Suggests" in your DESCRIPTION file. See the Renviron.bioc for details. |
Package 896/2194 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
Harshlight 1.73.0 (landing page) Maurizio Pellegrino
| kunpeng1 | Linux (Ubuntu 22.04.1 LTS) / aarch64 | OK | OK | WARNINGS | |||||||||
Package: Harshlight |
Version: 1.73.0 |
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL Harshlight |
StartedAt: 2023-05-08 21:30:54 -0000 (Mon, 08 May 2023) |
EndedAt: 2023-05-08 21:31:12 -0000 (Mon, 08 May 2023) |
EllapsedTime: 17.4 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL Harshlight ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.17-bioc/R-devel_2023-03-12_r83975-bin/site-library’ * installing *source* package ‘Harshlight’ ... ** using staged installation ** libs using C compiler: ‘gcc (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0’ gcc -I"/home/biocbuild/bbs-3.17-bioc/R-devel_2023-03-12_r83975-bin/lib/R/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c Harshlight.c -o Harshlight.o Harshlight.c: In function ‘report_overall_header’: Harshlight.c:1471:26: warning: unknown conversion type character ‘)’ in format [-Wformat=] 1471 | PP "%d %d moveto (%.2f%) show\n", x_text_val, y_text - 215, *diff_br); | ^ Harshlight.c:1474:26: warning: unknown conversion type character ‘)’ in format [-Wformat=] 1474 | PP "%d %d moveto (%.2f%) show\n", x_text_val, y_text - 230, *diff_dr); | ^ Harshlight.c: In function ‘chip_summary’: Harshlight.c:1532:107: warning: unknown conversion type character ‘)’ in format [-Wformat=] 1532 | PP "%d %d moveto (Extended defects: the variance of the Error Image explained by the background is %.2f%) show\n", x_text, y_text - 30, *var); | ^ Harshlight.c:1542:26: warning: unknown conversion type character ‘)’ in format [-Wformat=] 1542 | PP "%d %d moveto (%.2f%) show\n", x_val_1, y_text - 100, *perc_c); | ^ Harshlight.c:1543:26: warning: unknown conversion type character ‘)’ in format [-Wformat=] 1543 | PP "%d %d moveto (%.2f%) show\n", x_val_2, y_text - 100, *perc_d); | ^ Harshlight.c: In function ‘extended_stop’: Harshlight.c:1555:107: warning: unknown conversion type character ‘)’ in format [-Wformat=] 1555 | PP "%d %d moveto (Extended defects: the variance of the Error Image explained by the background is %.2f%) show\n", x_text, y_text - 30, *var); | ^ gcc -shared -L/usr/local/lib -o Harshlight.so Harshlight.o installing to /home/biocbuild/bbs-3.17-bioc/R-devel_2023-03-12_r83975-bin/site-library/00LOCK-Harshlight/00new/Harshlight/libs ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Harshlight)