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This page was generated on 2023-05-10 10:04:39 -0000 (Wed, 10 May 2023).

HostnameOSArch (*)R versionInstalled pkgs
kunpeng1Linux (Ubuntu 22.04.1 LTS)aarch64R Under development (unstable) (2023-03-12 r83975) -- "Unsuffered Consequences" 6211
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BUILD results for RcisTarget on kunpeng1


To the developers/maintainers of the RcisTarget package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/RcisTarget.git to reflect on this report. See Troubleshooting Build Report for more information.

- Use the following Renviron settings to reproduce errors and warnings.

Note: If "R CMD check" recently failed on the Linux builder over a missing dependency, add the missing dependency to "Suggests" in your DESCRIPTION file. See the Renviron.bioc for details.

raw results

Package 1617/2194HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
RcisTarget 1.21.0  (landing page)
Sara Aibar
Snapshot Date: 2023-05-08 19:11:19 -0000 (Mon, 08 May 2023)
git_url: https://git.bioconductor.org/packages/RcisTarget
git_branch: devel
git_last_commit: c5e900e
git_last_commit_date: 2023-04-25 14:59:02 -0000 (Tue, 25 Apr 2023)
kunpeng1Linux (Ubuntu 22.04.1 LTS) / aarch64  OK    ERROR  skipped

Summary

Package: RcisTarget
Version: 1.21.0
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data RcisTarget
StartedAt: 2023-05-09 05:10:38 -0000 (Tue, 09 May 2023)
EndedAt: 2023-05-09 05:12:27 -0000 (Tue, 09 May 2023)
EllapsedTime: 109.2 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data RcisTarget
###
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* checking for file ‘RcisTarget/DESCRIPTION’ ... OK
* preparing ‘RcisTarget’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘RcisTarget_MainTutorial.Rmd’ using rmarkdown
--- finished re-building ‘RcisTarget_MainTutorial.Rmd’

--- re-building ‘Tutorial_AnalysisOfGenomicRegions.Rmd’ using rmarkdown
trying URL 'https://gbiomed.kuleuven.be/apps/lcb/i-cisTarget/examples/input_files/human/peaks/Encode_GATA1_peaks.bed'
Quitting from lines 32-35 (Tutorial_AnalysisOfGenomicRegions.Rmd) 
Error: processing vignette 'Tutorial_AnalysisOfGenomicRegions.Rmd' failed with diagnostics:
cannot open URL 'https://gbiomed.kuleuven.be/apps/lcb/i-cisTarget/examples/input_files/human/peaks/Encode_GATA1_peaks.bed'
--- failed re-building ‘Tutorial_AnalysisOfGenomicRegions.Rmd’

--- re-building ‘Tutorial_AnalysisWithBackground.Rmd’ using rmarkdown
--- finished re-building ‘Tutorial_AnalysisWithBackground.Rmd’

SUMMARY: processing the following file failed:
  ‘Tutorial_AnalysisOfGenomicRegions.Rmd’

Error: Vignette re-building failed.
Execution halted