Back to Build/check report for BioC 3.18:   simplified   long
ABCD[E]FGHIJKLMNOPQRSTUVWXYZ

This page was generated on 2023-05-10 10:04:30 -0000 (Wed, 10 May 2023).

HostnameOSArch (*)R versionInstalled pkgs
kunpeng1Linux (Ubuntu 22.04.1 LTS)aarch64R Under development (unstable) (2023-03-12 r83975) -- "Unsuffered Consequences" 6211
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for eisaR on kunpeng1


To the developers/maintainers of the eisaR package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/eisaR.git to reflect on this report. See Troubleshooting Build Report for more information.

- Use the following Renviron settings to reproduce errors and warnings.

Note: If "R CMD check" recently failed on the Linux builder over a missing dependency, add the missing dependency to "Suggests" in your DESCRIPTION file. See the Renviron.bioc for details.

raw results

Package 612/2194HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
eisaR 1.13.0  (landing page)
Michael Stadler
Snapshot Date: 2023-05-08 19:11:19 -0000 (Mon, 08 May 2023)
git_url: https://git.bioconductor.org/packages/eisaR
git_branch: devel
git_last_commit: 8fb40e1
git_last_commit_date: 2023-04-25 15:16:12 -0000 (Tue, 25 Apr 2023)
kunpeng1Linux (Ubuntu 22.04.1 LTS) / aarch64  OK    ERROR  skipped

Summary

Package: eisaR
Version: 1.13.0
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data eisaR
StartedAt: 2023-05-09 01:26:28 -0000 (Tue, 09 May 2023)
EndedAt: 2023-05-09 01:27:26 -0000 (Tue, 09 May 2023)
EllapsedTime: 58.1 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data eisaR
###
##############################################################################
##############################################################################


* checking for file ‘eisaR/DESCRIPTION’ ... OK
* preparing ‘eisaR’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘eisaR.Rmd’ using rmarkdown
Quitting from lines 134-143 (eisaR.Rmd) 
Error: processing vignette 'eisaR.Rmd' failed with diagnostics:
The Rhisat2 package is required for alignments, but not installed.
Install it using BiocManager::install("Rhisat2")
--- failed re-building ‘eisaR.Rmd’

--- re-building ‘rna-velocity.Rmd’ using rmarkdown
--- finished re-building ‘rna-velocity.Rmd’

SUMMARY: processing the following file failed:
  ‘eisaR.Rmd’

Error: Vignette re-building failed.
Execution halted