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This page was generated on 2023-05-10 10:04:34 -0000 (Wed, 10 May 2023).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| kunpeng1 | Linux (Ubuntu 22.04.1 LTS) | aarch64 | R Under development (unstable) (2023-03-12 r83975) -- "Unsuffered Consequences" | 6211 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the lpsymphony package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/lpsymphony.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. Note: If "R CMD check" recently failed on the Linux builder over a missing dependency, add the missing dependency to "Suggests" in your DESCRIPTION file. See the Renviron.bioc for details. |
| Package 1069/2194 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| lpsymphony 1.29.0 (landing page) Vladislav Kim
| kunpeng1 | Linux (Ubuntu 22.04.1 LTS) / aarch64 | ERROR | ERROR | skipped | |||||||||
| Package: lpsymphony |
| Version: 1.29.0 |
| Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data lpsymphony |
| StartedAt: 2023-05-09 03:06:47 -0000 (Tue, 09 May 2023) |
| EndedAt: 2023-05-09 03:06:51 -0000 (Tue, 09 May 2023) |
| EllapsedTime: 4.0 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
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### Running command:
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### /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data lpsymphony
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* checking for file ‘lpsymphony/DESCRIPTION’ ... OK
* preparing ‘lpsymphony’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* running ‘cleanup’
* installing the package to build vignettes
-----------------------------------
* installing *source* package ‘lpsymphony’ ...
** using staged installation
configure: loading site script /tmp/Rtmp7FwX09/Rbuild107e8228943a13/lpsymphony/src/SYMPHONY/share/config.site
checking build system type... ./config.guess: unable to guess system type
This script, last modified 2007-05-17, has failed to recognize
the operating system you are using. It is advised that you
download the most up to date version of the config scripts from
http://savannah.gnu.org/cgi-bin/viewcvs/*checkout*/config/config/config.guess
and
http://savannah.gnu.org/cgi-bin/viewcvs/*checkout*/config/config/config.sub
If the version you run (./config.guess) is already up to date, please
send the following data and any information you think might be
pertinent to <config-patches@gnu.org> in order to provide the needed
information to handle your system.
config.guess timestamp = 2007-05-17
uname -m = aarch64
uname -r = 5.15.0-71-generic
uname -s = Linux
uname -v = #78-Ubuntu SMP Tue Apr 18 09:00:08 UTC 2023
/usr/bin/uname -p = aarch64
/bin/uname -X =
hostinfo =
/bin/universe =
/usr/bin/arch -k =
/bin/arch = aarch64
/usr/bin/oslevel =
/usr/convex/getsysinfo =
UNAME_MACHINE = aarch64
UNAME_RELEASE = 5.15.0-71-generic
UNAME_SYSTEM = Linux
UNAME_VERSION = #78-Ubuntu SMP Tue Apr 18 09:00:08 UTC 2023
configure: error: cannot guess build type; you must specify one
** libs
using C++ compiler: ‘g++ (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0’
make[1]: Entering directory '/tmp/Rtmp7FwX09/Rbuild107e8228943a13/lpsymphony/src/SYMPHONY'
make[1]: *** No targets specified and no makefile found. Stop.
make[1]: Leaving directory '/tmp/Rtmp7FwX09/Rbuild107e8228943a13/lpsymphony/src/SYMPHONY'
make: *** [Makevars:13: SYMPHONY.ts] Error 2
ERROR: compilation failed for package ‘lpsymphony’
* removing ‘/tmp/Rtmp7FwX09/Rinst107e8222d9310/lpsymphony’
-----------------------------------
ERROR: package installation failed