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This page was generated on 2023-05-10 10:04:37 -0000 (Wed, 10 May 2023).

HostnameOSArch (*)R versionInstalled pkgs
kunpeng1Linux (Ubuntu 22.04.1 LTS)aarch64R Under development (unstable) (2023-03-12 r83975) -- "Unsuffered Consequences" 6211
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for projectR on kunpeng1


To the developers/maintainers of the projectR package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/projectR.git to reflect on this report. See Troubleshooting Build Report for more information.

- Use the following Renviron settings to reproduce errors and warnings.

Note: If "R CMD check" recently failed on the Linux builder over a missing dependency, add the missing dependency to "Suggests" in your DESCRIPTION file. See the Renviron.bioc for details.

raw results

Package 1536/2194HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
projectR 1.17.5  (landing page)
Genevieve Stein-O'Brien
Snapshot Date: 2023-05-08 19:11:19 -0000 (Mon, 08 May 2023)
git_url: https://git.bioconductor.org/packages/projectR
git_branch: devel
git_last_commit: ef4a595
git_last_commit_date: 2023-05-03 13:58:35 -0000 (Wed, 03 May 2023)
kunpeng1Linux (Ubuntu 22.04.1 LTS) / aarch64  OK    ERROR  skipped

Summary

Package: projectR
Version: 1.17.5
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data projectR
StartedAt: 2023-05-09 04:54:56 -0000 (Tue, 09 May 2023)
EndedAt: 2023-05-09 04:56:02 -0000 (Tue, 09 May 2023)
EllapsedTime: 66.1 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
###
###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data projectR
###
##############################################################################
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* checking for file ‘projectR/DESCRIPTION’ ... OK
* preparing ‘projectR’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘projectR.Rmd’ using rmarkdown
trying URL 'https://cloud.r-project.org/src/contrib/waldo_0.5.1.tar.gz'
Content type 'application/x-gzip' length 39619 bytes (38 KB)
==================================================
downloaded 38 KB

* installing *source* package ‘waldo’ ...
** package ‘waldo’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (waldo)

The downloaded source packages are in
	'/tmp/RtmpjQajMx/downloaded_packages'
fmtutil [ERROR]: format directory not writable: /var/lib/texmf/web2c
Error: processing vignette 'projectR.Rmd' failed with diagnostics:
Located more than one ‘weave’ output file (by engine ‘knitr::rmarkdown’) for vignette with name ‘projectR’: ‘projectR.html’ (1.1865e+06 bytes), ‘projectR.pdf’ (328032 bytes), ‘projectR.tex’ (56749 bytes)
--- failed re-building ‘projectR.Rmd’

SUMMARY: processing the following file failed:
  ‘projectR.Rmd’

Error: Vignette re-building failed.
Execution halted