Back to Build/check report for BioC 3.18: simplified long |
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This page was generated on 2023-05-31 05:44:36 -0000 (Wed, 31 May 2023).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
kunpeng1 | Linux (Ubuntu 22.04.1 LTS) | aarch64 | 4.3.0 (2023-04-21) -- "Already Tomorrow" | 4219 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
To the developers/maintainers of the HPiP package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/HPiP.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. Note: If "R CMD check" recently failed on the Linux builder over a missing dependency, add the missing dependency to "Suggests" in your DESCRIPTION file. See the Renviron.bioc for details. |
Package 936/2197 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
HPiP 1.7.0 (landing page) Matineh Rahmatbakhsh
| kunpeng1 | Linux (Ubuntu 22.04.1 LTS) / aarch64 | OK | OK | ERROR | |||||||||
Package: HPiP |
Version: 1.7.0 |
Command: /home/biocbuild/R/R-4.3.0/bin/R CMD check --install=check:HPiP.install-out.txt --library=/home/biocbuild/R/R-4.3.0/site-library --timings HPiP_1.7.0.tar.gz |
StartedAt: 2023-05-30 09:47:40 -0000 (Tue, 30 May 2023) |
EndedAt: 2023-05-30 09:55:59 -0000 (Tue, 30 May 2023) |
EllapsedTime: 498.7 seconds |
RetCode: 1 |
Status: ERROR |
CheckDir: HPiP.Rcheck |
Warnings: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R-4.3.0/bin/R CMD check --install=check:HPiP.install-out.txt --library=/home/biocbuild/R/R-4.3.0/site-library --timings HPiP_1.7.0.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/home/biocbuild/bbs-3.18-bioc/meat/HPiP.Rcheck’ * using R version 4.3.0 (2023-04-21) * using platform: aarch64-unknown-linux-gnu (64-bit) * R was compiled by gcc (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0 GNU Fortran (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0 * running under: Ubuntu 22.04.2 LTS * using session charset: UTF-8 * checking for file ‘HPiP/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘HPiP’ version ‘1.7.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘HPiP’ can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... NOTE Package unavailable to check Rd xrefs: ‘ftrCOOL’ * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking R/sysdata.rda ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK Examples with CPU (user + system) or elapsed time > 5s user system elapsed var_imp 40.284 0.640 40.923 FSmethod 37.631 0.616 38.248 corr_plot 37.545 0.540 38.084 pred_ensembel 17.985 0.603 16.220 getFASTA 1.142 0.030 11.497 enrichfindP 0.429 0.048 14.626 * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘runTests.R’ OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in ‘inst/doc’ ... OK * checking running R code from vignettes ... ‘HPiP_tutorial.Rmd’ using ‘UTF-8’... OK NONE * checking re-building of vignette outputs ... ERROR Error(s) in re-building vignettes: ... --- re-building ‘HPiP_tutorial.Rmd’ using rmarkdown Quitting from lines 928-938 [unnamed-chunk-50] (HPiP_tutorial.Rmd) Error: processing vignette 'HPiP_tutorial.Rmd' failed with diagnostics: replacement has length zero --- failed re-building ‘HPiP_tutorial.Rmd’ SUMMARY: processing the following file failed: ‘HPiP_tutorial.Rmd’ Error: Vignette re-building failed. Execution halted * checking PDF version of manual ... OK * DONE Status: 1 ERROR, 1 NOTE See ‘/home/biocbuild/bbs-3.18-bioc/meat/HPiP.Rcheck/00check.log’ for details.
HPiP.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R-4.3.0/bin/R CMD INSTALL HPiP ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/R/R-4.3.0/site-library’ * installing *source* package ‘HPiP’ ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (HPiP)
HPiP.Rcheck/tests/runTests.Rout
R version 4.3.0 (2023-04-21) -- "Already Tomorrow" Copyright (C) 2023 The R Foundation for Statistical Computing Platform: aarch64-unknown-linux-gnu (64-bit) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > BiocGenerics:::testPackage('HPiP') No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE avNNet Loading required package: ggplot2 Loading required package: lattice Fitting Repeat 1 # weights: 103 initial value 96.254122 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 102.708652 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 96.561843 final value 94.484053 converged Fitting Repeat 4 # weights: 103 initial value 97.807741 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 103.397946 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 104.605520 final value 94.484211 converged Fitting Repeat 2 # weights: 305 initial value 97.312456 iter 10 value 94.466667 iter 10 value 94.466667 iter 10 value 94.466667 final value 94.466667 converged Fitting Repeat 3 # weights: 305 initial value 102.204106 final value 94.467391 converged Fitting Repeat 4 # weights: 305 initial value 99.899284 final value 94.484211 converged Fitting Repeat 5 # weights: 305 initial value 95.704504 final value 94.484211 converged Fitting Repeat 1 # weights: 507 initial value 96.918009 final value 94.484210 converged Fitting Repeat 2 # weights: 507 initial value 115.378626 iter 10 value 94.089164 final value 94.089147 converged Fitting Repeat 3 # weights: 507 initial value 111.009723 final value 94.484211 converged Fitting Repeat 4 # weights: 507 initial value 105.895974 final value 94.484211 converged Fitting Repeat 5 # weights: 507 initial value 106.736194 iter 10 value 93.464318 iter 20 value 86.156590 iter 30 value 85.695949 iter 40 value 85.694120 final value 85.694118 converged Fitting Repeat 1 # weights: 103 initial value 99.512123 iter 10 value 94.301856 iter 20 value 86.154226 iter 30 value 83.925695 iter 40 value 83.650752 iter 50 value 82.657748 iter 60 value 82.015823 iter 70 value 81.910099 final value 81.905179 converged Fitting Repeat 2 # weights: 103 initial value 101.188987 iter 10 value 94.477508 iter 20 value 89.022652 iter 30 value 84.086595 iter 40 value 81.560518 iter 50 value 80.367580 iter 60 value 79.764501 iter 70 value 79.591667 iter 80 value 79.503467 iter 90 value 79.441893 final value 79.441891 converged Fitting Repeat 3 # weights: 103 initial value 98.668402 iter 10 value 94.516316 iter 20 value 94.478154 iter 30 value 88.226994 iter 40 value 87.511407 iter 50 value 83.713099 iter 60 value 82.417397 iter 70 value 82.273916 iter 80 value 82.079463 iter 90 value 82.021062 final value 82.020096 converged Fitting Repeat 4 # weights: 103 initial value 105.594859 iter 10 value 94.480772 iter 20 value 94.036322 iter 30 value 93.805796 iter 40 value 84.660958 iter 50 value 84.337296 iter 60 value 83.891562 iter 70 value 83.041792 iter 80 value 82.796007 iter 90 value 82.752644 iter 90 value 82.752644 iter 90 value 82.752644 final value 82.752644 converged Fitting Repeat 5 # weights: 103 initial value 98.988120 iter 10 value 94.891336 iter 20 value 94.491406 iter 30 value 94.439145 iter 40 value 91.474101 iter 50 value 85.847950 iter 60 value 85.632905 iter 70 value 83.227422 iter 80 value 82.707800 iter 90 value 82.373287 iter 100 value 82.338531 final value 82.338531 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 111.351946 iter 10 value 94.830251 iter 20 value 87.292692 iter 30 value 83.875831 iter 40 value 80.533009 iter 50 value 79.409972 iter 60 value 78.878559 iter 70 value 78.728772 iter 80 value 78.538941 iter 90 value 78.353470 iter 100 value 78.336834 final value 78.336834 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 101.384431 iter 10 value 94.489229 iter 20 value 90.525767 iter 30 value 85.810808 iter 40 value 82.964798 iter 50 value 82.389042 iter 60 value 81.212985 iter 70 value 79.261205 iter 80 value 78.385978 iter 90 value 78.163520 iter 100 value 78.099185 final value 78.099185 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 102.303871 iter 10 value 94.164857 iter 20 value 88.180133 iter 30 value 81.872283 iter 40 value 81.100149 iter 50 value 80.341630 iter 60 value 80.079402 iter 70 value 79.278566 iter 80 value 78.712678 iter 90 value 78.270189 iter 100 value 78.198786 final value 78.198786 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 113.289247 iter 10 value 93.918111 iter 20 value 87.401147 iter 30 value 86.670677 iter 40 value 85.555700 iter 50 value 83.908614 iter 60 value 83.820319 iter 70 value 83.117167 iter 80 value 82.623987 iter 90 value 81.427358 iter 100 value 80.828228 final value 80.828228 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 103.225263 iter 10 value 94.465442 iter 20 value 91.799582 iter 30 value 91.242434 iter 40 value 87.268484 iter 50 value 83.306501 iter 60 value 82.018852 iter 70 value 81.032794 iter 80 value 80.821766 iter 90 value 80.607720 iter 100 value 80.103898 final value 80.103898 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 129.418910 iter 10 value 94.496436 iter 20 value 89.609282 iter 30 value 84.036370 iter 40 value 83.298332 iter 50 value 82.316679 iter 60 value 78.971173 iter 70 value 78.475014 iter 80 value 78.240629 iter 90 value 77.798353 iter 100 value 77.684059 final value 77.684059 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 115.597045 iter 10 value 95.051311 iter 20 value 91.961549 iter 30 value 83.302884 iter 40 value 81.004454 iter 50 value 79.766491 iter 60 value 78.867818 iter 70 value 78.666157 iter 80 value 78.635893 iter 90 value 78.547678 iter 100 value 78.395145 final value 78.395145 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 142.160604 iter 10 value 93.961491 iter 20 value 89.175450 iter 30 value 85.640274 iter 40 value 83.521745 iter 50 value 80.383336 iter 60 value 79.898972 iter 70 value 78.974516 iter 80 value 78.453260 iter 90 value 77.828125 iter 100 value 77.703397 final value 77.703397 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 105.839902 iter 10 value 88.720370 iter 20 value 83.512608 iter 30 value 80.959017 iter 40 value 80.097745 iter 50 value 79.471862 iter 60 value 79.266083 iter 70 value 78.987967 iter 80 value 78.768486 iter 90 value 78.535430 iter 100 value 78.358431 final value 78.358431 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 110.914213 iter 10 value 97.966209 iter 20 value 91.867086 iter 30 value 85.439131 iter 40 value 81.274750 iter 50 value 80.668004 iter 60 value 78.919102 iter 70 value 78.399945 iter 80 value 77.979610 iter 90 value 77.884251 iter 100 value 77.679428 final value 77.679428 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 94.876916 final value 94.485827 converged Fitting Repeat 2 # weights: 103 initial value 94.841667 final value 94.485618 converged Fitting Repeat 3 # weights: 103 initial value 97.100840 final value 94.485887 converged Fitting Repeat 4 # weights: 103 initial value 97.928423 final value 94.485607 converged Fitting Repeat 5 # weights: 103 initial value 102.430792 final value 94.485620 converged Fitting Repeat 1 # weights: 305 initial value 94.570174 iter 10 value 94.331122 iter 20 value 86.625237 iter 30 value 82.825643 iter 40 value 82.816745 iter 50 value 82.754901 iter 60 value 82.730464 iter 70 value 82.729772 iter 80 value 82.648135 iter 90 value 82.521699 iter 100 value 81.789161 final value 81.789161 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 107.982536 iter 10 value 94.488909 iter 20 value 94.320785 iter 30 value 85.844129 final value 85.844122 converged Fitting Repeat 3 # weights: 305 initial value 101.394314 iter 10 value 94.489329 iter 20 value 94.349948 iter 30 value 86.111357 iter 40 value 86.075875 iter 50 value 86.020219 iter 60 value 86.017608 final value 86.017584 converged Fitting Repeat 4 # weights: 305 initial value 99.473018 iter 10 value 94.489003 iter 20 value 83.916982 iter 30 value 82.763670 final value 82.761134 converged Fitting Repeat 5 # weights: 305 initial value 106.406130 iter 10 value 94.489425 iter 20 value 94.419547 iter 30 value 91.669985 iter 40 value 82.358593 iter 50 value 82.353083 iter 60 value 81.199118 iter 70 value 81.123207 iter 80 value 81.122309 iter 90 value 81.025080 iter 100 value 81.003880 final value 81.003880 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 104.217508 iter 10 value 94.475221 iter 20 value 93.390717 iter 30 value 93.153008 iter 40 value 92.620457 iter 50 value 92.605329 iter 60 value 92.395446 iter 70 value 81.964117 iter 80 value 81.865520 iter 90 value 80.542003 iter 100 value 79.534095 final value 79.534095 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 97.788145 iter 10 value 94.491437 iter 20 value 92.873083 iter 30 value 91.137738 iter 40 value 91.120325 iter 50 value 91.055562 iter 60 value 89.781416 final value 89.760215 converged Fitting Repeat 3 # weights: 507 initial value 94.617966 iter 10 value 94.491752 iter 20 value 94.252037 iter 30 value 85.856844 iter 40 value 85.783325 iter 50 value 85.783227 iter 60 value 85.781830 final value 84.522472 converged Fitting Repeat 4 # weights: 507 initial value 105.253921 iter 10 value 94.475789 iter 20 value 94.469187 iter 30 value 94.453559 iter 40 value 94.324094 iter 50 value 91.181191 iter 60 value 91.092251 iter 70 value 91.088573 iter 80 value 91.082963 iter 90 value 91.075920 iter 100 value 91.073619 final value 91.073619 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 105.496854 iter 10 value 94.474810 iter 20 value 94.428156 iter 30 value 85.365566 iter 40 value 85.070018 iter 50 value 85.024252 iter 60 value 85.022183 iter 70 value 83.635882 iter 80 value 80.700929 iter 90 value 80.640082 iter 100 value 80.639254 final value 80.639254 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 94.730921 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 100.162533 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 100.878646 final value 93.837464 converged Fitting Repeat 4 # weights: 103 initial value 94.525595 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 99.140440 final value 94.354396 converged Fitting Repeat 1 # weights: 305 initial value 99.376837 final value 94.354396 converged Fitting Repeat 2 # weights: 305 initial value 103.499727 iter 10 value 93.871479 iter 20 value 93.857541 iter 30 value 93.650110 final value 93.649843 converged Fitting Repeat 3 # weights: 305 initial value 101.172733 iter 10 value 93.856097 iter 20 value 83.117457 iter 30 value 82.214790 iter 40 value 82.100788 final value 82.099569 converged Fitting Repeat 4 # weights: 305 initial value 119.925178 iter 10 value 93.918906 iter 20 value 89.641531 iter 30 value 89.528598 final value 89.528569 converged Fitting Repeat 5 # weights: 305 initial value 101.947693 final value 94.484211 converged Fitting Repeat 1 # weights: 507 initial value 101.663320 final value 94.354396 converged Fitting Repeat 2 # weights: 507 initial value 107.421670 final value 93.769960 converged Fitting Repeat 3 # weights: 507 initial value 118.417451 final value 94.484211 converged Fitting Repeat 4 # weights: 507 initial value 112.106884 iter 10 value 94.502833 final value 94.484212 converged Fitting Repeat 5 # weights: 507 initial value 117.755883 iter 10 value 87.955529 iter 20 value 87.213384 iter 30 value 87.208321 iter 30 value 87.208320 iter 30 value 87.208320 final value 87.208320 converged Fitting Repeat 1 # weights: 103 initial value 112.030864 iter 10 value 93.883733 iter 20 value 86.275398 iter 30 value 85.984318 iter 40 value 85.724833 iter 50 value 85.405189 iter 60 value 85.197075 iter 70 value 84.915767 iter 80 value 84.854653 iter 90 value 83.090828 iter 100 value 82.429468 final value 82.429468 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 102.430312 iter 10 value 94.380861 iter 20 value 91.009216 iter 30 value 90.722317 iter 40 value 89.534730 iter 50 value 87.841609 iter 60 value 85.770517 iter 70 value 85.128411 iter 80 value 85.090970 iter 90 value 85.090441 final value 85.090335 converged Fitting Repeat 3 # weights: 103 initial value 99.259779 iter 10 value 94.418547 iter 20 value 90.543443 iter 30 value 88.697795 iter 40 value 88.399368 iter 50 value 86.025710 iter 60 value 84.814868 iter 70 value 84.450451 final value 84.441524 converged Fitting Repeat 4 # weights: 103 initial value 100.841400 iter 10 value 94.353912 iter 20 value 90.142531 iter 30 value 88.718864 iter 40 value 85.030544 iter 50 value 84.417028 iter 60 value 84.102186 final value 84.079543 converged Fitting Repeat 5 # weights: 103 initial value 103.659617 iter 10 value 94.492015 iter 20 value 94.437238 iter 30 value 93.855223 iter 40 value 93.469188 iter 50 value 89.926330 iter 60 value 89.275677 iter 70 value 85.953229 iter 80 value 85.685623 iter 90 value 85.178852 iter 100 value 84.877024 final value 84.877024 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 103.421259 iter 10 value 93.518081 iter 20 value 85.960169 iter 30 value 85.475050 iter 40 value 83.008617 iter 50 value 81.455916 iter 60 value 81.283567 iter 70 value 81.230344 iter 80 value 81.174385 iter 90 value 81.094229 iter 100 value 80.836451 final value 80.836451 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 113.526058 iter 10 value 94.841663 iter 20 value 94.338820 iter 30 value 89.096998 iter 40 value 85.782255 iter 50 value 84.769920 iter 60 value 83.187707 iter 70 value 82.411564 iter 80 value 81.739514 iter 90 value 81.698989 iter 100 value 81.349659 final value 81.349659 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 103.205014 iter 10 value 94.731105 iter 20 value 94.425625 iter 30 value 93.109878 iter 40 value 90.153614 iter 50 value 88.984903 iter 60 value 88.449764 iter 70 value 83.495503 iter 80 value 82.233065 iter 90 value 81.536705 iter 100 value 81.278807 final value 81.278807 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 108.574494 iter 10 value 94.397280 iter 20 value 93.902805 iter 30 value 88.067354 iter 40 value 84.573677 iter 50 value 83.865682 iter 60 value 83.641488 iter 70 value 83.598159 iter 80 value 83.377597 iter 90 value 82.440452 iter 100 value 81.901897 final value 81.901897 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 114.988432 iter 10 value 94.418162 iter 20 value 89.074686 iter 30 value 86.105803 iter 40 value 84.026607 iter 50 value 83.453757 iter 60 value 82.782470 iter 70 value 82.656454 iter 80 value 82.523281 iter 90 value 81.838510 iter 100 value 81.611702 final value 81.611702 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 119.322606 iter 10 value 94.493062 iter 20 value 91.745941 iter 30 value 87.851478 iter 40 value 85.433345 iter 50 value 85.236612 iter 60 value 85.173620 iter 70 value 85.078653 iter 80 value 84.735889 iter 90 value 84.418900 iter 100 value 83.830818 final value 83.830818 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 108.501363 iter 10 value 94.706568 iter 20 value 92.663378 iter 30 value 88.045817 iter 40 value 85.175691 iter 50 value 84.694086 iter 60 value 82.575378 iter 70 value 81.360973 iter 80 value 81.273919 iter 90 value 81.134885 iter 100 value 81.074760 final value 81.074760 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 109.536520 iter 10 value 94.546690 iter 20 value 93.871112 iter 30 value 88.257166 iter 40 value 84.622963 iter 50 value 82.637167 iter 60 value 82.060022 iter 70 value 81.764363 iter 80 value 81.670516 iter 90 value 81.282864 iter 100 value 81.158241 final value 81.158241 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 106.378365 iter 10 value 94.477863 iter 20 value 92.350428 iter 30 value 90.148680 iter 40 value 85.995296 iter 50 value 83.670619 iter 60 value 82.549122 iter 70 value 82.445765 iter 80 value 82.272105 iter 90 value 82.083660 iter 100 value 81.897551 final value 81.897551 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 112.351099 iter 10 value 94.608257 iter 20 value 92.741562 iter 30 value 91.577149 iter 40 value 83.622926 iter 50 value 83.319641 iter 60 value 83.039020 iter 70 value 81.905053 iter 80 value 81.450510 iter 90 value 81.378842 iter 100 value 81.194407 final value 81.194407 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 94.615069 final value 94.486144 converged Fitting Repeat 2 # weights: 103 initial value 95.824387 final value 94.485899 converged Fitting Repeat 3 # weights: 103 initial value 97.410403 final value 94.485722 converged Fitting Repeat 4 # weights: 103 initial value 94.693678 final value 94.485850 converged Fitting Repeat 5 # weights: 103 initial value 102.881169 final value 94.485830 converged Fitting Repeat 1 # weights: 305 initial value 108.786542 iter 10 value 94.489450 iter 20 value 93.951569 iter 30 value 93.788233 final value 93.788224 converged Fitting Repeat 2 # weights: 305 initial value 109.627392 iter 10 value 94.359421 iter 20 value 94.355027 final value 94.354737 converged Fitting Repeat 3 # weights: 305 initial value 95.418058 iter 10 value 94.489046 iter 20 value 94.480462 iter 30 value 87.501480 iter 40 value 84.800645 iter 50 value 83.879352 iter 60 value 83.834095 iter 70 value 83.191564 iter 80 value 82.064870 iter 90 value 81.919707 iter 100 value 81.814574 final value 81.814574 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 99.147016 iter 10 value 94.488421 iter 20 value 94.484269 final value 94.484216 converged Fitting Repeat 5 # weights: 305 initial value 103.319509 iter 10 value 94.489324 iter 20 value 94.476982 iter 30 value 94.105979 iter 40 value 94.105384 final value 94.105356 converged Fitting Repeat 1 # weights: 507 initial value 101.713129 iter 10 value 94.362359 iter 20 value 94.356563 iter 30 value 94.208083 iter 40 value 93.690944 iter 50 value 92.537115 iter 60 value 87.443404 iter 70 value 83.218818 iter 80 value 81.770494 iter 90 value 81.692319 final value 81.641377 converged Fitting Repeat 2 # weights: 507 initial value 99.326262 iter 10 value 94.491334 iter 20 value 90.729847 iter 30 value 84.749974 iter 40 value 84.749369 iter 50 value 84.749057 final value 84.749052 converged Fitting Repeat 3 # weights: 507 initial value 109.195152 iter 10 value 93.703500 iter 20 value 93.702782 iter 30 value 93.587550 iter 40 value 86.718134 iter 50 value 85.405336 iter 60 value 84.694705 iter 70 value 84.274043 iter 80 value 83.996951 iter 90 value 83.499490 iter 100 value 83.264890 final value 83.264890 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 95.761172 iter 10 value 94.489304 iter 20 value 94.468883 iter 30 value 92.652042 iter 40 value 84.873608 iter 50 value 84.737557 iter 60 value 83.112601 iter 70 value 82.994216 iter 80 value 82.979144 iter 90 value 82.979112 iter 100 value 82.979009 final value 82.979009 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 100.261323 iter 10 value 94.132582 iter 20 value 94.108720 iter 30 value 93.896622 iter 40 value 89.474310 iter 50 value 84.719158 iter 60 value 84.432193 iter 70 value 84.178633 iter 80 value 84.177953 final value 84.177526 converged Fitting Repeat 1 # weights: 103 initial value 101.113693 final value 94.052910 converged Fitting Repeat 2 # weights: 103 initial value 105.670191 final value 93.836066 converged Fitting Repeat 3 # weights: 103 initial value 104.557731 final value 94.052910 converged Fitting Repeat 4 # weights: 103 initial value 107.797684 final value 94.052910 converged Fitting Repeat 5 # weights: 103 initial value 94.962185 final value 94.052910 converged Fitting Repeat 1 # weights: 305 initial value 99.390112 final value 93.944596 converged Fitting Repeat 2 # weights: 305 initial value 100.513604 final value 94.052911 converged Fitting Repeat 3 # weights: 305 initial value 97.917959 final value 94.052910 converged Fitting Repeat 4 # weights: 305 initial value 100.116251 final value 94.052910 converged Fitting Repeat 5 # weights: 305 initial value 119.995619 iter 10 value 93.838746 final value 93.836066 converged Fitting Repeat 1 # weights: 507 initial value 102.510473 final value 93.836066 converged Fitting Repeat 2 # weights: 507 initial value 122.791014 final value 94.052910 converged Fitting Repeat 3 # weights: 507 initial value 104.386174 final value 93.836066 converged Fitting Repeat 4 # weights: 507 initial value 105.760792 final value 94.052910 converged Fitting Repeat 5 # weights: 507 initial value 98.341998 final value 93.183861 converged Fitting Repeat 1 # weights: 103 initial value 105.389130 iter 10 value 94.055268 iter 20 value 93.647344 iter 30 value 91.506494 iter 40 value 91.407337 iter 50 value 85.162686 iter 60 value 84.088236 iter 70 value 83.294274 iter 80 value 81.614112 iter 90 value 81.480225 final value 81.475611 converged Fitting Repeat 2 # weights: 103 initial value 102.985612 iter 10 value 94.072027 iter 20 value 92.970773 iter 30 value 89.124368 iter 40 value 87.191589 iter 50 value 86.789379 iter 60 value 85.133947 iter 70 value 82.529665 iter 80 value 81.801553 iter 90 value 81.756699 iter 100 value 81.404477 final value 81.404477 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 99.446967 iter 10 value 94.056576 iter 20 value 93.648335 iter 30 value 89.858306 iter 40 value 87.182964 iter 50 value 86.015476 iter 60 value 84.998345 iter 70 value 84.488252 iter 80 value 83.904320 iter 90 value 83.722265 iter 100 value 83.710592 final value 83.710592 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 99.274034 iter 10 value 94.052183 iter 20 value 89.268706 iter 30 value 85.508646 iter 40 value 84.786958 iter 50 value 84.500179 iter 60 value 81.777960 iter 70 value 81.527835 iter 80 value 81.291678 final value 81.281404 converged Fitting Repeat 5 # weights: 103 initial value 117.357271 iter 10 value 94.054877 iter 20 value 93.615917 iter 30 value 93.303349 iter 40 value 93.276342 iter 50 value 87.561326 iter 60 value 86.134193 iter 70 value 84.824223 iter 80 value 84.703621 iter 90 value 84.133064 iter 100 value 82.518088 final value 82.518088 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 99.434854 iter 10 value 94.073196 iter 20 value 93.901749 iter 30 value 92.032989 iter 40 value 91.806955 iter 50 value 91.292057 iter 60 value 90.898285 iter 70 value 90.311780 iter 80 value 86.022048 iter 90 value 84.132010 iter 100 value 83.103665 final value 83.103665 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 107.727428 iter 10 value 92.585912 iter 20 value 87.738574 iter 30 value 87.311750 iter 40 value 85.085163 iter 50 value 83.647106 iter 60 value 83.208312 iter 70 value 82.382577 iter 80 value 81.508494 iter 90 value 81.131458 iter 100 value 81.013267 final value 81.013267 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 98.727427 iter 10 value 90.827936 iter 20 value 86.807799 iter 30 value 84.017975 iter 40 value 83.483092 iter 50 value 83.449890 iter 60 value 83.337548 iter 70 value 82.968305 iter 80 value 82.668699 iter 90 value 81.385364 iter 100 value 80.902012 final value 80.902012 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 106.590434 iter 10 value 93.648272 iter 20 value 90.581219 iter 30 value 89.434781 iter 40 value 89.186080 iter 50 value 86.744307 iter 60 value 85.759687 iter 70 value 85.557899 iter 80 value 85.433017 iter 90 value 85.330061 iter 100 value 82.633723 final value 82.633723 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 102.804423 iter 10 value 94.121276 iter 20 value 93.713576 iter 30 value 93.504879 iter 40 value 89.495518 iter 50 value 86.272489 iter 60 value 83.566948 iter 70 value 82.979006 iter 80 value 82.432966 iter 90 value 82.302996 iter 100 value 82.089243 final value 82.089243 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 106.432364 iter 10 value 94.185040 iter 20 value 93.952573 iter 30 value 93.385450 iter 40 value 88.459931 iter 50 value 84.929828 iter 60 value 84.037399 iter 70 value 82.276012 iter 80 value 81.623252 iter 90 value 80.648055 iter 100 value 80.337036 final value 80.337036 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 120.418479 iter 10 value 94.078544 iter 20 value 86.661072 iter 30 value 84.131543 iter 40 value 82.702686 iter 50 value 81.780595 iter 60 value 81.329427 iter 70 value 81.031129 iter 80 value 80.774555 iter 90 value 80.654418 iter 100 value 80.476969 final value 80.476969 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 114.868456 iter 10 value 92.218022 iter 20 value 88.157367 iter 30 value 86.420570 iter 40 value 85.217936 iter 50 value 82.985669 iter 60 value 82.274509 iter 70 value 82.075808 iter 80 value 81.460827 iter 90 value 80.956048 iter 100 value 80.542297 final value 80.542297 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 126.467842 iter 10 value 94.054395 iter 20 value 87.092187 iter 30 value 85.663439 iter 40 value 82.403427 iter 50 value 81.328888 iter 60 value 80.972554 iter 70 value 80.767390 iter 80 value 80.673804 iter 90 value 80.587232 iter 100 value 80.527774 final value 80.527774 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 107.604101 iter 10 value 93.858148 iter 20 value 85.127604 iter 30 value 84.618874 iter 40 value 82.439033 iter 50 value 80.901514 iter 60 value 80.453832 iter 70 value 80.232014 iter 80 value 80.061074 iter 90 value 79.873623 iter 100 value 79.753940 final value 79.753940 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 106.738149 final value 94.054520 converged Fitting Repeat 2 # weights: 103 initial value 100.726569 final value 94.054684 converged Fitting Repeat 3 # weights: 103 initial value 97.589974 iter 10 value 93.569461 iter 20 value 93.536733 iter 30 value 93.535855 final value 93.535557 converged Fitting Repeat 4 # weights: 103 initial value 99.492627 final value 94.051336 converged Fitting Repeat 5 # weights: 103 initial value 102.626881 iter 10 value 94.054426 iter 20 value 94.052927 iter 30 value 93.918177 iter 40 value 86.038368 iter 50 value 86.037681 iter 60 value 86.035480 iter 70 value 86.035296 iter 80 value 86.035100 iter 90 value 83.836028 iter 100 value 83.647080 final value 83.647080 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 99.232869 iter 10 value 94.058246 iter 20 value 94.048399 iter 30 value 83.700265 iter 40 value 83.192983 iter 50 value 83.018407 iter 60 value 82.991589 iter 70 value 82.977611 iter 80 value 82.773607 iter 90 value 81.717438 iter 100 value 81.652419 final value 81.652419 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 99.068004 iter 10 value 94.057240 iter 20 value 94.032093 iter 30 value 87.966197 iter 40 value 85.617021 iter 50 value 84.643159 iter 60 value 84.434661 iter 70 value 83.556066 iter 80 value 83.488682 iter 90 value 83.488314 iter 100 value 83.487787 final value 83.487787 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 94.606661 iter 10 value 93.840813 iter 20 value 93.836424 final value 93.836405 converged Fitting Repeat 4 # weights: 305 initial value 116.847407 iter 10 value 94.056607 iter 20 value 93.858787 final value 93.830762 converged Fitting Repeat 5 # weights: 305 initial value 99.282121 iter 10 value 93.841101 iter 20 value 92.550639 iter 30 value 90.738610 iter 40 value 90.736641 iter 50 value 90.736338 iter 60 value 89.653621 iter 70 value 89.594280 final value 89.594138 converged Fitting Repeat 1 # weights: 507 initial value 107.020140 iter 10 value 93.844165 iter 20 value 93.420733 iter 30 value 86.036814 iter 40 value 86.035231 iter 50 value 86.034917 iter 60 value 85.689184 iter 70 value 85.457979 iter 80 value 85.432806 final value 85.432761 converged Fitting Repeat 2 # weights: 507 initial value 117.653797 iter 10 value 93.007374 iter 20 value 90.218364 iter 30 value 86.139667 iter 40 value 86.055056 iter 50 value 86.048161 iter 60 value 86.043933 iter 70 value 86.042849 iter 80 value 86.042637 iter 90 value 86.039072 iter 100 value 86.038873 final value 86.038873 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 97.166991 iter 10 value 93.709707 iter 20 value 93.580113 final value 93.435381 converged Fitting Repeat 4 # weights: 507 initial value 112.832931 iter 10 value 94.059929 iter 20 value 94.052477 iter 30 value 84.208018 iter 40 value 82.637386 iter 50 value 80.141228 iter 60 value 79.454229 iter 70 value 79.196145 iter 80 value 79.194862 final value 79.193134 converged Fitting Repeat 5 # weights: 507 initial value 106.306938 iter 10 value 94.028928 iter 20 value 93.952271 iter 30 value 93.470264 iter 40 value 93.090143 final value 93.075103 converged Fitting Repeat 1 # weights: 103 initial value 98.762773 final value 94.052910 converged Fitting Repeat 2 # weights: 103 initial value 101.128585 final value 94.052910 converged Fitting Repeat 3 # weights: 103 initial value 94.133284 final value 94.052910 converged Fitting Repeat 4 # weights: 103 initial value 106.347414 final value 94.052910 converged Fitting Repeat 5 # weights: 103 initial value 96.024145 final value 94.052910 converged Fitting Repeat 1 # weights: 305 initial value 96.119457 final value 94.052910 converged Fitting Repeat 2 # weights: 305 initial value 99.881397 iter 10 value 94.051397 final value 94.043243 converged Fitting Repeat 3 # weights: 305 initial value 103.704086 final value 93.900000 converged Fitting Repeat 4 # weights: 305 initial value 95.199497 final value 94.052910 converged Fitting Repeat 5 # weights: 305 initial value 106.723802 final value 94.052910 converged Fitting Repeat 1 # weights: 507 initial value 114.918154 final value 94.052910 converged Fitting Repeat 2 # weights: 507 initial value 98.976009 final value 94.052910 converged Fitting Repeat 3 # weights: 507 initial value 104.119268 final value 94.052910 converged Fitting Repeat 4 # weights: 507 initial value 96.248187 final value 94.052910 converged Fitting Repeat 5 # weights: 507 initial value 99.358472 final value 94.052910 converged Fitting Repeat 1 # weights: 103 initial value 97.028232 iter 10 value 94.060346 iter 20 value 93.772743 iter 30 value 93.683944 iter 40 value 93.455029 iter 50 value 89.313689 iter 60 value 87.137981 iter 70 value 86.372355 iter 80 value 85.684309 iter 90 value 85.457589 iter 100 value 85.330981 final value 85.330981 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 100.353337 iter 10 value 94.070031 iter 20 value 93.742081 iter 30 value 93.709173 iter 40 value 93.683963 iter 50 value 88.901424 iter 60 value 87.132569 iter 70 value 86.202435 iter 80 value 85.685873 iter 90 value 85.081450 iter 100 value 84.854992 final value 84.854992 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 105.843410 iter 10 value 94.025421 iter 20 value 93.697362 iter 30 value 89.011204 iter 40 value 88.738598 iter 50 value 88.649752 iter 60 value 87.517830 iter 70 value 86.474007 iter 80 value 85.779887 iter 90 value 85.396347 iter 100 value 85.340883 final value 85.340883 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 96.921453 iter 10 value 94.025170 iter 20 value 92.971278 iter 30 value 92.683985 iter 40 value 92.607068 iter 50 value 92.404619 iter 60 value 92.349534 iter 70 value 85.262472 iter 80 value 84.951467 iter 90 value 84.767057 iter 100 value 84.530207 final value 84.530207 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 97.971568 iter 10 value 94.027930 iter 20 value 93.201943 iter 30 value 91.717504 iter 40 value 91.327343 iter 50 value 90.171007 iter 60 value 87.717746 iter 70 value 86.384239 iter 80 value 85.665747 iter 90 value 85.613740 iter 100 value 84.628929 final value 84.628929 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 115.946198 iter 10 value 94.130760 iter 20 value 93.677387 iter 30 value 91.954913 iter 40 value 88.161325 iter 50 value 85.533301 iter 60 value 84.379097 iter 70 value 84.284734 iter 80 value 84.179683 iter 90 value 83.978027 iter 100 value 83.469018 final value 83.469018 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 102.677997 iter 10 value 94.048133 iter 20 value 93.633806 iter 30 value 92.790658 iter 40 value 90.589622 iter 50 value 87.636298 iter 60 value 86.063042 iter 70 value 85.392251 iter 80 value 85.215666 iter 90 value 85.120237 iter 100 value 84.937661 final value 84.937661 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 110.169198 iter 10 value 94.047725 iter 20 value 88.833553 iter 30 value 87.306006 iter 40 value 86.897465 iter 50 value 86.477116 iter 60 value 84.723286 iter 70 value 84.210439 iter 80 value 83.620151 iter 90 value 83.222234 iter 100 value 82.964634 final value 82.964634 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 107.651651 iter 10 value 98.276711 iter 20 value 94.325890 iter 30 value 93.135884 iter 40 value 92.657463 iter 50 value 92.430723 iter 60 value 92.071614 iter 70 value 92.002295 iter 80 value 86.877798 iter 90 value 86.717965 iter 100 value 85.770683 final value 85.770683 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 100.796154 iter 10 value 94.474828 iter 20 value 94.295607 iter 30 value 93.835552 iter 40 value 93.719082 iter 50 value 93.143965 iter 60 value 89.776342 iter 70 value 86.682212 iter 80 value 84.373189 iter 90 value 84.137930 iter 100 value 83.856287 final value 83.856287 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 106.547444 iter 10 value 94.564626 iter 20 value 93.507222 iter 30 value 92.731353 iter 40 value 92.527092 iter 50 value 91.625904 iter 60 value 88.462872 iter 70 value 86.903726 iter 80 value 85.211677 iter 90 value 83.851772 iter 100 value 83.215490 final value 83.215490 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 114.599888 iter 10 value 94.047953 iter 20 value 92.401618 iter 30 value 87.592192 iter 40 value 86.688796 iter 50 value 85.006932 iter 60 value 83.842132 iter 70 value 83.526321 iter 80 value 83.020733 iter 90 value 82.660372 iter 100 value 82.471915 final value 82.471915 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 109.073675 iter 10 value 95.602280 iter 20 value 92.968631 iter 30 value 88.573066 iter 40 value 88.086320 iter 50 value 86.654647 iter 60 value 85.639051 iter 70 value 85.342073 iter 80 value 85.238798 iter 90 value 85.033728 iter 100 value 84.589319 final value 84.589319 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 119.781091 iter 10 value 96.121889 iter 20 value 95.576361 iter 30 value 92.001996 iter 40 value 87.159217 iter 50 value 85.018409 iter 60 value 83.648588 iter 70 value 83.254256 iter 80 value 82.993374 iter 90 value 82.661140 iter 100 value 82.430886 final value 82.430886 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 114.200611 iter 10 value 94.097497 iter 20 value 91.585131 iter 30 value 90.693242 iter 40 value 89.177633 iter 50 value 85.832701 iter 60 value 85.295468 iter 70 value 84.710585 iter 80 value 84.025728 iter 90 value 83.600866 iter 100 value 83.406754 final value 83.406754 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 114.376261 final value 94.054791 converged Fitting Repeat 2 # weights: 103 initial value 113.998289 final value 94.054862 converged Fitting Repeat 3 # weights: 103 initial value 101.553929 iter 10 value 94.054678 final value 94.052928 converged Fitting Repeat 4 # weights: 103 initial value 97.716756 final value 94.054455 converged Fitting Repeat 5 # weights: 103 initial value 101.740726 final value 94.054421 converged Fitting Repeat 1 # weights: 305 initial value 102.431139 iter 10 value 93.587470 iter 20 value 93.585781 iter 30 value 93.584011 iter 40 value 93.577239 iter 50 value 87.710719 iter 60 value 87.081522 iter 70 value 86.409039 iter 80 value 86.285147 iter 90 value 86.284776 iter 100 value 86.284353 final value 86.284353 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 94.837654 iter 10 value 93.465430 iter 20 value 93.464060 iter 30 value 93.228671 iter 40 value 92.501679 iter 50 value 92.474596 iter 60 value 92.474419 final value 92.474374 converged Fitting Repeat 3 # weights: 305 initial value 101.121725 iter 10 value 93.324323 iter 20 value 93.322160 iter 30 value 93.307244 iter 40 value 93.305143 iter 50 value 93.299947 iter 60 value 93.278060 iter 70 value 88.705723 iter 80 value 86.819843 iter 90 value 86.474134 final value 86.474122 converged Fitting Repeat 4 # weights: 305 initial value 106.268928 iter 10 value 94.058310 iter 20 value 93.989808 iter 30 value 93.583342 iter 30 value 93.583341 iter 30 value 93.583341 final value 93.583341 converged Fitting Repeat 5 # weights: 305 initial value 116.128164 iter 10 value 94.029987 iter 20 value 94.012306 iter 30 value 93.873661 iter 40 value 93.770052 iter 50 value 87.569773 iter 60 value 87.392455 iter 70 value 87.046224 iter 80 value 86.468875 iter 90 value 86.363116 final value 86.363006 converged Fitting Repeat 1 # weights: 507 initial value 121.897908 iter 10 value 93.480873 iter 20 value 87.014056 iter 30 value 86.937376 iter 40 value 86.121858 final value 86.121836 converged Fitting Repeat 2 # weights: 507 initial value 94.559432 iter 10 value 86.403141 iter 20 value 85.704670 iter 30 value 84.963200 iter 40 value 84.616993 iter 50 value 84.545449 iter 60 value 84.544194 iter 70 value 83.659666 iter 80 value 83.279449 iter 90 value 83.278819 iter 100 value 83.275931 final value 83.275931 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 99.831213 iter 10 value 94.060957 iter 20 value 94.045368 iter 30 value 93.791705 final value 93.582721 converged Fitting Repeat 4 # weights: 507 initial value 99.359086 iter 10 value 93.676302 iter 20 value 93.590926 iter 30 value 93.535882 iter 40 value 88.857885 iter 50 value 88.037468 iter 60 value 87.749143 iter 70 value 87.452908 iter 80 value 85.603470 iter 90 value 83.200979 iter 100 value 83.124529 final value 83.124529 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 112.425308 iter 10 value 93.591498 iter 20 value 93.584206 iter 30 value 93.583482 final value 93.583457 converged Fitting Repeat 1 # weights: 103 initial value 96.280700 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 95.219777 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 102.022101 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 98.369681 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 95.486961 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 95.048519 iter 10 value 94.109864 iter 20 value 93.684427 iter 30 value 93.672370 final value 93.670383 converged Fitting Repeat 2 # weights: 305 initial value 103.264086 final value 94.484211 converged Fitting Repeat 3 # weights: 305 initial value 112.629006 final value 94.484211 converged Fitting Repeat 4 # weights: 305 initial value 110.954469 final value 94.484211 converged Fitting Repeat 5 # weights: 305 initial value 98.376413 final value 94.484211 converged Fitting Repeat 1 # weights: 507 initial value 102.237981 iter 10 value 93.362987 final value 93.285720 converged Fitting Repeat 2 # weights: 507 initial value 106.836036 final value 94.443243 converged Fitting Repeat 3 # weights: 507 initial value 97.660488 final value 94.443243 converged Fitting Repeat 4 # weights: 507 initial value 102.791097 iter 10 value 93.452494 iter 20 value 88.127008 iter 30 value 84.774671 final value 84.766416 converged Fitting Repeat 5 # weights: 507 initial value 98.536163 final value 94.443243 converged Fitting Repeat 1 # weights: 103 initial value 99.027950 iter 10 value 94.488766 iter 20 value 93.986062 iter 30 value 93.914332 iter 40 value 92.069108 iter 50 value 84.328205 iter 60 value 84.200270 iter 70 value 84.144794 iter 80 value 84.098326 iter 90 value 84.092114 final value 84.092095 converged Fitting Repeat 2 # weights: 103 initial value 97.110674 iter 10 value 94.489582 iter 20 value 93.259075 iter 30 value 84.216054 iter 40 value 84.127853 iter 50 value 84.101630 iter 60 value 83.684828 iter 70 value 83.532375 final value 83.530131 converged Fitting Repeat 3 # weights: 103 initial value 98.466623 iter 10 value 94.486710 iter 20 value 94.399176 iter 30 value 90.784870 iter 40 value 84.198485 iter 50 value 84.159813 iter 60 value 83.576795 iter 70 value 83.526082 iter 80 value 83.523604 final value 83.523600 converged Fitting Repeat 4 # weights: 103 initial value 105.834466 iter 10 value 94.201528 iter 20 value 87.689755 iter 30 value 86.749057 iter 40 value 86.273822 iter 50 value 83.187821 iter 60 value 83.076458 iter 70 value 83.064465 final value 83.064037 converged Fitting Repeat 5 # weights: 103 initial value 96.208970 iter 10 value 94.482241 iter 20 value 91.535432 iter 30 value 84.746647 iter 40 value 84.156487 iter 50 value 83.890365 iter 60 value 83.809244 final value 83.805596 converged Fitting Repeat 1 # weights: 305 initial value 103.303287 iter 10 value 94.483069 iter 20 value 93.932701 iter 30 value 92.997699 iter 40 value 86.734012 iter 50 value 85.276290 iter 60 value 81.074523 iter 70 value 79.742275 iter 80 value 79.058200 iter 90 value 77.998519 iter 100 value 77.599500 final value 77.599500 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 101.083231 iter 10 value 94.493252 iter 20 value 88.248331 iter 30 value 86.335429 iter 40 value 86.096237 iter 50 value 82.559693 iter 60 value 80.762503 iter 70 value 79.457296 iter 80 value 79.278559 iter 90 value 78.971725 iter 100 value 78.424970 final value 78.424970 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 99.952748 iter 10 value 94.369708 iter 20 value 91.725461 iter 30 value 87.565064 iter 40 value 83.229794 iter 50 value 79.579985 iter 60 value 78.202244 iter 70 value 78.084488 iter 80 value 77.894988 iter 90 value 77.826152 iter 100 value 77.797104 final value 77.797104 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 104.924313 iter 10 value 96.967671 iter 20 value 85.527085 iter 30 value 81.471291 iter 40 value 80.405575 iter 50 value 79.174833 iter 60 value 78.607775 iter 70 value 78.344731 iter 80 value 78.322108 iter 90 value 78.313083 final value 78.312662 converged Fitting Repeat 5 # weights: 305 initial value 113.597882 iter 10 value 94.605905 iter 20 value 94.345206 iter 30 value 93.550303 iter 40 value 84.290788 iter 50 value 83.125114 iter 60 value 82.983963 iter 70 value 82.727111 iter 80 value 82.603432 iter 90 value 82.497902 iter 100 value 81.699248 final value 81.699248 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 104.131923 iter 10 value 94.693384 iter 20 value 87.325640 iter 30 value 85.121366 iter 40 value 84.175759 iter 50 value 83.150688 iter 60 value 82.407590 iter 70 value 80.149586 iter 80 value 78.693493 iter 90 value 77.831822 iter 100 value 77.570045 final value 77.570045 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 131.967962 iter 10 value 95.366485 iter 20 value 94.408590 iter 30 value 88.068746 iter 40 value 83.709392 iter 50 value 82.915731 iter 60 value 82.496677 iter 70 value 81.125358 iter 80 value 79.837090 iter 90 value 79.114120 iter 100 value 78.968750 final value 78.968750 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 111.236887 iter 10 value 94.400550 iter 20 value 84.126459 iter 30 value 81.922228 iter 40 value 81.497932 iter 50 value 80.850395 iter 60 value 80.468307 iter 70 value 80.287638 iter 80 value 79.600227 iter 90 value 78.810233 iter 100 value 78.012552 final value 78.012552 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 106.773844 iter 10 value 94.710932 iter 20 value 94.291624 iter 30 value 91.076099 iter 40 value 82.370930 iter 50 value 80.464410 iter 60 value 79.826125 iter 70 value 79.164258 iter 80 value 78.049793 iter 90 value 77.641236 iter 100 value 77.584751 final value 77.584751 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 106.879899 iter 10 value 94.452407 iter 20 value 92.077465 iter 30 value 82.902098 iter 40 value 81.794698 iter 50 value 80.238882 iter 60 value 78.663454 iter 70 value 78.326363 iter 80 value 78.294898 iter 90 value 78.272125 iter 100 value 78.166213 final value 78.166213 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 100.221535 final value 94.444833 converged Fitting Repeat 2 # weights: 103 initial value 98.143298 iter 10 value 94.487700 final value 94.485901 converged Fitting Repeat 3 # weights: 103 initial value 104.152811 iter 10 value 93.975322 iter 20 value 86.230092 iter 30 value 86.060080 iter 40 value 86.054919 iter 50 value 86.054680 final value 86.054677 converged Fitting Repeat 4 # weights: 103 initial value 101.904100 iter 10 value 94.485696 iter 20 value 94.301073 final value 94.105975 converged Fitting Repeat 5 # weights: 103 initial value 95.394646 final value 94.485731 converged Fitting Repeat 1 # weights: 305 initial value 98.604072 iter 10 value 90.320756 iter 20 value 90.226313 iter 30 value 90.203878 iter 40 value 90.175919 iter 50 value 90.171826 iter 60 value 90.171507 final value 90.171332 converged Fitting Repeat 2 # weights: 305 initial value 101.770490 iter 10 value 94.489119 iter 20 value 94.251012 iter 30 value 92.940847 iter 40 value 92.938982 iter 50 value 92.937620 iter 60 value 92.937510 final value 92.937443 converged Fitting Repeat 3 # weights: 305 initial value 107.094398 iter 10 value 94.496594 iter 20 value 87.686118 iter 30 value 86.068535 iter 40 value 86.060069 iter 50 value 86.057070 iter 60 value 83.671233 iter 70 value 83.031616 iter 80 value 83.030662 final value 83.026681 converged Fitting Repeat 4 # weights: 305 initial value 96.437250 iter 10 value 94.448183 iter 20 value 94.443496 final value 94.443314 converged Fitting Repeat 5 # weights: 305 initial value 121.512398 iter 10 value 94.447682 iter 20 value 94.443634 iter 30 value 93.320481 iter 40 value 85.674884 iter 50 value 85.673054 final value 85.672802 converged Fitting Repeat 1 # weights: 507 initial value 108.403791 iter 10 value 91.260812 iter 20 value 89.125503 iter 30 value 89.077270 iter 40 value 89.074716 iter 50 value 89.069272 final value 89.069234 converged Fitting Repeat 2 # weights: 507 initial value 113.906096 iter 10 value 94.493822 iter 20 value 94.487207 iter 30 value 94.485204 iter 40 value 94.416214 final value 94.106547 converged Fitting Repeat 3 # weights: 507 initial value 119.506704 iter 10 value 94.452269 iter 20 value 94.443542 iter 30 value 94.404708 iter 40 value 85.254199 iter 50 value 83.029420 iter 60 value 82.999748 iter 70 value 82.998949 final value 82.998948 converged Fitting Repeat 4 # weights: 507 initial value 100.724563 iter 10 value 94.489887 iter 20 value 93.293367 iter 30 value 85.761812 iter 40 value 85.683128 iter 50 value 85.648474 iter 60 value 85.626226 iter 70 value 85.625114 final value 85.622984 converged Fitting Repeat 5 # weights: 507 initial value 102.187846 iter 10 value 94.153237 iter 20 value 94.096747 iter 30 value 93.686677 iter 40 value 93.671531 iter 50 value 93.671201 final value 93.670793 converged Fitting Repeat 1 # weights: 305 initial value 131.469728 iter 10 value 119.391297 iter 20 value 115.091752 iter 30 value 106.805197 iter 40 value 105.609879 iter 50 value 105.393983 iter 60 value 105.240056 iter 70 value 104.336511 iter 80 value 103.275206 iter 90 value 103.137816 iter 100 value 102.833555 final value 102.833555 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 127.077836 iter 10 value 117.568482 iter 20 value 112.521780 iter 30 value 106.807467 iter 40 value 105.282369 iter 50 value 104.675882 iter 60 value 103.834625 iter 70 value 102.044234 iter 80 value 100.891671 iter 90 value 100.533661 iter 100 value 100.440812 final value 100.440812 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 129.030288 iter 10 value 117.714242 iter 20 value 112.074281 iter 30 value 106.846360 iter 40 value 105.210047 iter 50 value 103.892018 iter 60 value 102.665832 iter 70 value 101.511656 iter 80 value 101.130755 iter 90 value 101.116340 iter 100 value 101.074947 final value 101.074947 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 145.080401 iter 10 value 120.908329 iter 20 value 117.903666 iter 30 value 117.894522 iter 40 value 114.880375 iter 50 value 111.935099 iter 60 value 110.068169 iter 70 value 106.431930 iter 80 value 105.890765 iter 90 value 104.088840 iter 100 value 102.438971 final value 102.438971 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 125.246071 iter 10 value 117.960938 iter 20 value 116.124458 iter 30 value 109.755488 iter 40 value 107.671631 iter 50 value 106.503666 iter 60 value 106.449073 iter 70 value 106.372965 iter 80 value 104.543534 iter 90 value 102.836683 iter 100 value 101.868407 final value 101.868407 stopped after 100 iterations svmRadial ranger Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases RUNIT TEST PROTOCOL -- Tue May 30 09:53:15 2023 *********************************************** Number of test functions: 7 Number of errors: 0 Number of failures: 0 1 Test Suite : HPiP RUnit Tests - 7 test functions, 0 errors, 0 failures Number of test functions: 7 Number of errors: 0 Number of failures: 0 Warning messages: 1: `repeats` has no meaning for this resampling method. 2: executing %dopar% sequentially: no parallel backend registered > > > > > proc.time() user system elapsed 51.206 1.728 63.794
HPiP.Rcheck/HPiP-Ex.timings
name | user | system | elapsed | |
FSmethod | 37.631 | 0.616 | 38.248 | |
FreqInteractors | 0.302 | 0.020 | 0.322 | |
calculateAAC | 0.052 | 0.000 | 0.052 | |
calculateAutocor | 0.710 | 0.020 | 0.731 | |
calculateCTDC | 0.099 | 0.004 | 0.103 | |
calculateCTDD | 0.836 | 0.012 | 0.848 | |
calculateCTDT | 0.275 | 0.016 | 0.291 | |
calculateCTriad | 0.474 | 0.008 | 0.482 | |
calculateDC | 0.127 | 0.004 | 0.131 | |
calculateF | 0.404 | 0.008 | 0.412 | |
calculateKSAAP | 0.14 | 0.00 | 0.14 | |
calculateQD_Sm | 2.481 | 0.052 | 2.533 | |
calculateTC | 2.382 | 0.048 | 2.430 | |
calculateTC_Sm | 0.323 | 0.004 | 0.327 | |
corr_plot | 37.545 | 0.540 | 38.084 | |
enrichfindP | 0.429 | 0.048 | 14.626 | |
enrichfind_hp | 0.049 | 0.008 | 1.374 | |
enrichplot | 0.376 | 0.120 | 0.496 | |
filter_missing_values | 0.000 | 0.001 | 0.002 | |
getFASTA | 1.142 | 0.030 | 11.497 | |
getHPI | 0.000 | 0.001 | 0.001 | |
get_negativePPI | 0.000 | 0.003 | 0.004 | |
get_positivePPI | 0.000 | 0.000 | 0.001 | |
impute_missing_data | 0.002 | 0.001 | 0.003 | |
plotPPI | 0.082 | 0.020 | 0.102 | |
pred_ensembel | 17.985 | 0.603 | 16.220 | |
var_imp | 40.284 | 0.640 | 40.923 | |