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### Running command:
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###   /home/biocbuild/R/R-4.3.0/bin/R CMD build --keep-empty-dirs --no-resave-data affyPLM
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* checking for file ‘affyPLM/DESCRIPTION’ ... OK
* preparing ‘affyPLM’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘AffyExtensions.Rnw’ using Sweave
Loading required package: BiocGenerics

Attaching package: ‘BiocGenerics’

The following objects are masked from ‘package:stats’:

    IQR, mad, sd, var, xtabs

The following objects are masked from ‘package:base’:

    Filter, Find, Map, Position, Reduce, anyDuplicated, aperm, append,
    as.data.frame, basename, cbind, colnames, dirname, do.call,
    duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted,
    lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin,
    pmin.int, rank, rbind, rownames, sapply, setdiff, sort, table,
    tapply, union, unique, unsplit, which.max, which.min

Loading required package: affy
Loading required package: Biobase
Welcome to Bioconductor

    Vignettes contain introductory material; view with
    'browseVignettes()'. To cite Bioconductor, see
    'citation("Biobase")', and for packages 'citation("pkgname")'.

Loading required package: gcrma
Loading required package: preprocessCore
Loading required package: affydata
Warning in library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE,  :
  there is no package called ‘affydata’
Warning in data(Dilution) : data set ‘Dilution’ not found

Error: processing vignette 'AffyExtensions.Rnw' failed with diagnostics:
 chunk 1 (label = loadData) 
Error in h(simpleError(msg, call)) : 
  error in evaluating the argument 'object' in selecting a method for function 'updateObject': object 'Dilution' not found

--- failed re-building ‘AffyExtensions.Rnw’

--- re-building ‘MAplots.Rnw’ using Sweave
Loading required package: affydata
Warning in library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE,  :
  there is no package called ‘affydata’
Warning in data(Dilution) : data set ‘Dilution’ not found

Error: processing vignette 'MAplots.Rnw' failed with diagnostics:
 chunk 2 (label = makeExpressionSet) 
Error in h(simpleError(msg, call)) : 
  error in evaluating the argument 'object' in selecting a method for function 'probeNames': object 'Dilution' not found

--- failed re-building ‘MAplots.Rnw’

--- re-building ‘QualityAssess.Rnw’ using Sweave
Loading required package: affydata
Warning in library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE,  :
  there is no package called ‘affydata’
Warning in data(Dilution) : data set ‘Dilution’ not found

Error: processing vignette 'QualityAssess.Rnw' failed with diagnostics:
 chunk 2 (label = loadData) 
Error in h(simpleError(msg, call)) : 
  error in evaluating the argument 'object' in selecting a method for function 'updateObject': object 'Dilution' not found

--- failed re-building ‘QualityAssess.Rnw’

--- re-building ‘ThreeStep.Rnw’ using Sweave
--- finished re-building ‘ThreeStep.Rnw’

SUMMARY: processing the following files failed:
  ‘AffyExtensions.Rnw’
  ‘MAplots.Rnw’ ‘QualityAssess.Rnw’

Error: Vignette re-building failed.
Execution halted