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This page was generated on 2023-05-31 05:44:40 -0000 (Wed, 31 May 2023).

HostnameOSArch (*)R versionInstalled pkgs
kunpeng1Linux (Ubuntu 22.04.1 LTS)aarch644.3.0 (2023-04-21) -- "Already Tomorrow" 4219
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for projectR on kunpeng1


To the developers/maintainers of the projectR package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/projectR.git to reflect on this report. See Troubleshooting Build Report for more information.

- Use the following Renviron settings to reproduce errors and warnings.

Note: If "R CMD check" recently failed on the Linux builder over a missing dependency, add the missing dependency to "Suggests" in your DESCRIPTION file. See the Renviron.bioc for details.

raw results

Package 1539/2197HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
projectR 1.17.5  (landing page)
Genevieve Stein-O'Brien
Snapshot Date: 2023-05-29 10:19:22 -0000 (Mon, 29 May 2023)
git_url: https://git.bioconductor.org/packages/projectR
git_branch: devel
git_last_commit: ef4a595
git_last_commit_date: 2023-05-03 13:58:35 -0000 (Wed, 03 May 2023)
kunpeng1Linux (Ubuntu 22.04.1 LTS) / aarch64  OK    ERROR  skipped

Summary

Package: projectR
Version: 1.17.5
Command: /home/biocbuild/R/R-4.3.0/bin/R CMD build --keep-empty-dirs --no-resave-data projectR
StartedAt: 2023-05-29 20:50:14 -0000 (Mon, 29 May 2023)
EndedAt: 2023-05-29 20:51:13 -0000 (Mon, 29 May 2023)
EllapsedTime: 59.1 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
###
###   /home/biocbuild/R/R-4.3.0/bin/R CMD build --keep-empty-dirs --no-resave-data projectR
###
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* checking for file ‘projectR/DESCRIPTION’ ... OK
* preparing ‘projectR’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘projectR.Rmd’ using rmarkdown
fmtutil [ERROR]: format directory not writable: /var/lib/texmf/web2c
Error: processing vignette 'projectR.Rmd' failed with diagnostics:
Located more than one ‘weave’ output file (by engine ‘knitr::rmarkdown’) for vignette with name ‘projectR’: ‘projectR.html’ (1.18651e+06 bytes), ‘projectR.pdf’ (328032 bytes), ‘projectR.tex’ (56749 bytes)
--- failed re-building ‘projectR.Rmd’

SUMMARY: processing the following file failed:
  ‘projectR.Rmd’

Error: Vignette re-building failed.
Execution halted