Back to Build/check report for BioC 3.17 |
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This page was generated on 2023-02-08 01:15:11 -0000 (Wed, 08 Feb 2023).
Hostname | OS | Arch (*) | R version | Installed pkgs |
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kunpeng1 | Linux (Ubuntu 22.04.1 LTS) | aarch64 | R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" | 4164 |
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Package 1021/2164 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
LEA 3.11.3 (landing page) Olivier Francois
| kunpeng1 | Linux (Ubuntu 22.04.1 LTS) / aarch64 | ERROR | ERROR | skipped | |||||||||
Package: LEA |
Version: 3.11.3 |
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL LEA |
StartedAt: 2023-02-06 01:48:41 -0000 (Mon, 06 Feb 2023) |
EndedAt: 2023-02-06 01:48:43 -0000 (Mon, 06 Feb 2023) |
EllapsedTime: 2.1 seconds |
RetCode: 1 |
Status: ERROR |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL LEA ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.17-bioc/R/library’ * installing *source* package ‘LEA’ ... ** using staged installation ** libs using C compiler: ‘gcc (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0’ gcc -I"/home/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I. -I/usr/local/include -fPIC -g -O2 -Wall -c R_LFMM.c -o R_LFMM.o gcc -I"/home/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I. -I/usr/local/include -fPIC -g -O2 -Wall -c R_crossEntropy.c -o R_crossEntropy.o gcc -I"/home/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I. -I/usr/local/include -fPIC -g -O2 -Wall -c R_createDataSet.c -o R_createDataSet.o gcc -I"/home/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I. -I/usr/local/include -fPIC -g -O2 -Wall -c R_sNMF.c -o R_sNMF.o In file included from sNMF/sNMF.h:13, from R_sNMF.c:24: sNMF/../bituint/bituint.h:212:2: error: #error Unsupported architecture 212 | #error Unsupported architecture | ^~~~~ sNMF/../bituint/bituint.h:223:23: error: unknown type name ‘bituint’; did you mean ‘uint’? 223 | void init_mat_bituint(bituint ** dat, int N, int Mc, int *Mp); | ^~~~~~~ | uint In file included from R_sNMF.c:24: sNMF/sNMF.h:62:9: error: unknown type name ‘bituint’ 62 | bituint *X; /**< @brief the data matrix (of size nxMp) */ | ^~~~~~~ sNMF/sNMF.h:63:9: error: unknown type name ‘bituint’ 63 | bituint *Xi; /**< @brief the init data matrix (of size nxMpi) */ | ^~~~~~~ make: *** [/home/biocbuild/bbs-3.17-bioc/R/etc/Makeconf:191: R_sNMF.o] Error 1 ERROR: compilation failed for package ‘LEA’ * removing ‘/home/biocbuild/bbs-3.17-bioc/R/library/LEA’